Examples
========

Running BLAST
-------------

This section of the documentation shows several examples adapted from real
examples, and running with the latest version of the PyHMMER interface.

.. toctree::
   :maxdepth: 2

   first_blast
   object_manager

External resources
------------------

The complete reference for the NCBI C++ Toolkit can be found in the 
`NCBI C++ Toolkit book <https://ncbi.github.io/cxx-toolkit/>`_. It describes the 
concepts behind the Toolkit data model, even though some implementation details
may differ between the C++ and Python interfaces.